Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807042.1_cds_XP_016494653.1_9045
CDS Infomation

[gene=LOC107813858] [db_xref=GeneID:107813858] [protein=alpha-dioxygenase 1-like] [protein_id=XP_016494653.1] [location=join(59308..59427,59817..60080,65413..65562,66520..66653,66731..66944,67517..67662,67760..67987,68541..68743,68894..69137,69686..69914)] [gbkey=CDS]
Sequence

ATGTCTTTGGTTATGGCATCCCTTAAGAATCTTTTGCTCTCCCCTCTTCGTGGTTTCATC
CACAAAGATTTCCATGATATCTTTGAGAGAATGACTCTCTTGGACAAGCTTTTTTTTCTG
ATTGTTCATTTCGTGGATAAGCTGAATCTTTGGCACCGGCTACCAGTGTTCTTGGGGCTG
CTTTATCTTGGAGCGCGGCGGCATCTGCATCAGGAATACAATTTGATCAACGTCGGCAAA
ACACCGGTCGGCGTCAGATCAAATCCGGCCGATCACCCTTATCGAACTGCCGACGGTAAA
TACAACGACCCCTTTAATGAAGGTGCAGGCAGTGAACTTTCATTTTTTGGGAGGAATATG
CTACCTGTTCATCAGCATAACCAGTTAAAGAAGCCAGACCCAATGGTGGTAGCAACGAAG
CTGCTAGCGAGGAGAAATTTTGTGGACACAGGAAAACAATTTAACATGATTGCTGCTTCT
TGGATTCAGTTTATGATTCATGATTGGATTGATCATTTGGAAGATACTAAGCAGATTGAG
CTTAAGGCACCTAAAGAAGTTGCAAGTCAATGCCCACTAAAGTCTTTTAAGTTTTTCAAG
ACCAAGGAAATTCCTACTGGCTTTTATGAAATCAAGACTGGTCATTTGAACACGCGTACC
CCCTGGTGGGATGGAAGTTCTATTTATGGAAGCAATGCAGAAGTTTTAAAGAAAGTGAGA
ACATTTAAAGATGGAAAGCTGAAACTATCAGCAGATGGGCTACTCGAAATAGACAAAAAT
GGGAAAATTATATCTGGTGATGTTCGTAACACTTGGGCTGGACTTTCTGCACTACAGGCT
CTCTTTGTTCAAGAGCACAATTCTGTTTGTGATGCCTTGAAGAAAGAATATCCAGAATTG
GAGGAGGAAGACTTGTATCGTCATGCAAGGCTGGTCACTTCTGCTGTTATTGCAAAAGTT
CACACAATTGATTGGACTGTTGAGCTTCTCAAAACGGATACCATGCTTGCAGCAATGCGT
ACCAATTGGTATGGATTACTAGGGAAGAAGTTTAAGGACACATTTGGGCACATTGGAGGT
TCAATTTTGGGTGGGTTTGTAGGAATGAAAAAACCTGAAAATCATGGAGTACCCTACTCC
TTGACTGAGGAATTTACGAGTGTTTACCGAATGCATCAACTTTTACCTGATAAGCTGCAG
CTGAGGAACGTAGATGCCACACCTGGACCAAACAAATCTCTCCCTTTGACTAATGAAATT
CCCATGGAAGATTTAATTGGGGGAAAAGGAGAGGAGAATTTATCAAGAATCGGTTTTACT
AAGCAAATGGTATCAATGGGTCACCAAGCCTGTGGAGCTCTTGAGCTTTGGAACTATCCA
GTGTGGATGAGGGATCTTGTTGCTCAAAATGTGGATGGGACTGATAGGCCAGATCATGTT
GATCTTGCAGCCCTTGAAATTTATAGGGACAGAGAAAGGAGTGTTGCTAGGTACAATGAA
TTTCGCAGAGGAATGCTGCAAATTCCCATCTCCAAATGGGAAGATTTGACGGACGATGAA
GAAGTGATTAATACACTTCGTGAAGTATATGGTGATGATGTAGAAGAATTGGATCTGATG
GTTGGAATGGCTGCCGAGAAAAAGATTAAGGGTTTTGCCATTTCGGAGACTGCCTTTTTC
ATATTCCTCATCATGGCATCAAGGAGGTTAGAGGCAGACAGATTTTTCACCAGCAATTAC
AAGGAGGAGACATATACAAAGAAAGGACTGGAATGGGTAAATACAACAGAAAGCTTGAAA
GATGTGTTAGATCGACATTACCCTGAAATAACTGAGAAATGGATGAACTCCAGCAGCGCA
TTCTCTGTTTGGGACTCTACTCCTGAACCTCACAATCCTATTCCACTCTACTTTCGCGTT
CCTCCACAGTAA

Peptide Sequence

PEP ID

XP_016494653.1
PEP Infomation

PREDICTED: alpha-dioxygenase 1-like [Nicotiana tabacum]
Sequence

MSLVMASLKNLLLSPLRGFIHKDFHDIFERMTLLDKLFFLIVHFVDKLNLWHRLPVFLGL
LYLGARRHLHQEYNLINVGKTPVGVRSNPADHPYRTADGKYNDPFNEGAGSELSFFGRNM
LPVHQHNQLKKPDPMVVATKLLARRNFVDTGKQFNMIAASWIQFMIHDWIDHLEDTKQIE
LKAPKEVASQCPLKSFKFFKTKEIPTGFYEIKTGHLNTRTPWWDGSSIYGSNAEVLKKVR
TFKDGKLKLSADGLLEIDKNGKIISGDVRNTWAGLSALQALFVQEHNSVCDALKKEYPEL
EEEDLYRHARLVTSAVIAKVHTIDWTVELLKTDTMLAAMRTNWYGLLGKKFKDTFGHIGG
SILGGFVGMKKPENHGVPYSLTEEFTSVYRMHQLLPDKLQLRNVDATPGPNKSLPLTNEI
PMEDLIGGKGEENLSRIGFTKQMVSMGHQACGALELWNYPVWMRDLVAQNVDGTDRPDHV
DLAALEIYRDRERSVARYNEFRRGMLQIPISKWEDLTDDEEVINTLREVYGDDVEELDLM
VGMAAEKKIKGFAISETAFFIFLIMASRRLEADRFFTSNYKEETYTKKGLEWVNTTESLK
DVLDRHYPEITEKWMNSSSAFSVWDSTPEPHNPIPLYFRVPPQ

Transcript Sequence

Gene sequence data has not been registered.